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Open Subsurface Data Universe Software
Platform
Domain Data Mgmt Services
Seismic
Seismic DMS Suite
seismic-dms-service
Commits
fe80aecc
Commit
fe80aecc
authored
Apr 06, 2021
by
David Diederich
Browse files
Merge remote-tracking branch 'origin/master' into feature/dperez50/fossa
Conflicts: .gitlab-ci.yml
parents
4e9112cb
8f1b056e
Pipeline
#34714
failed with stages
in 9 minutes and 40 seconds
Changes
88
Pipelines
1
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.gitignore
View file @
fe80aecc
...
...
@@ -29,5 +29,8 @@ keys
# newman junit output
newman
.DS_Store
.idea
# backup files
*.bak
\ No newline at end of file
.gitlab-ci.yml
View file @
fe80aecc
...
...
@@ -5,9 +5,18 @@ variables:
PORT
:
80
REPLICA
:
1
UTEST_RUNTIME_IMAGE
:
seistore-svc-runtime
#aws variables
AWS_ECR_REGION
:
us-east-1
#azure variables
AWS_SERVICE
:
seismic-store
AWS_BUILD_SUBDIR
:
src/cloud/providers/aws/build-aws
AWS_TEST_SUBDIR
:
tests
AWS_ENVIRONMENT
:
dev
AWS_BUILDER_DOCKERFILE_PATH
:
src/cloud/providers/aws/build-aws/builder.Dockerfile
AWS_RUNTIME_DOCKERFILE_PATH
:
src/cloud/providers/aws/build-aws/runtime.Dockerfile
# skipping tests here. Using a local file to run tests
AWS_SKIP_TESTS
:
"
true"
#azure variables
AZURE_SERVICE
:
seismic-store-service
#gcp variables
GCP_APPLICATION_NAME
:
os-seismic-store-service
...
...
@@ -40,9 +49,13 @@ include:
file
:
"
containerize/seismic-store-service.yml"
ref
:
slb/dperez50/aws-seismic-store-service
# aws
-
project
:
"
osdu/platform/ci-cd-pipelines"
file
:
"
cloud-providers/aws.yml"
-
local
:
"
/devops/aws/awstest.yml"
# deploy
#aws
#azure
-
project
:
"
osdu/platform/ci-cd-pipelines"
ref
:
"
fossa-node"
...
...
@@ -52,7 +65,8 @@ include:
-
project
:
"
osdu/platform/ci-cd-pipelines"
ref
:
"
fossa-node"
file
:
"
cloud-providers/ibm-seismic-store-service.yml"
#gcp
-
project
:
"
osdu/platform/ci-cd-pipelines"
ref
:
"
fossa-node"
...
...
README.md
View file @
fe80aecc
...
...
@@ -43,12 +43,12 @@ npm run code-coverage
--
run
-
parallel
# run the linter on sources
tslint
-
c
tslint
.
json
'src/**/*.ts'
tslint
-
c
tslint
.
json
-
p
tsconfig
.
json
'src/**/*.ts'
```
## Environment configuration
Environment variables can be provided with a
`.env`
file in the root of the project to be consumed
by
[
dotenv
](
https://github.com/motdotla/dotenv
)
. Environment variables are
[
preloaded
](
https://github.com/motdotla/dotenv#preload
)
by the
`npm start`
command with the argument
`-r dotenv/config`
. A template
`.env`
file can be found
by the
`npm start`
command with the argument
`-r dotenv/config`
. A template
`.env`
file can be found
in
`/docs/templates/.env-sample`
.
devops/aws/awstest.yml
0 → 100644
View file @
fe80aecc
aws-test-newman
:
extends
:
-
.aws
-
.aws_base_variables
-
.aws_variables
stage
:
integration
image
:
node
needs
:
[
'
aws-update-ecs'
]
script
:
-
apt-get update
-
apt-get install -y python
-
apt-get install -y python-pip
-
pip install -r devops/aws/requirements.txt
-
svctoken=$(python devops/scripts/aws_jwt_client.py)
-
npm install -g newman
-
chmod +x ./tests/e2e/run_e2e_tests.sh
-
./tests/e2e/run_e2e_tests.sh --seistore-svc-url=${SEISMICSTORE_SVC_URL} --seistore-svc-api-key="NA" --user-idtoken="$svctoken" --user-idtoken="$svctoken" --tenant=opendes --subproject=awsdemosubproject --admin-email="${AWS_COGNITO_AUTH_PARAMS_USER}" --datapartition=opendes --legaltag01=opendes-sdmstestlegaltag --legaltag02=opendes-sdmstestlegaltag --subproject-long-name=subprojectlonggggggggggggggggggggggname --VCS-Provider="${ISGITLAB}"
only
:
variables
:
-
$AWS == 'true'
artifacts
:
when
:
always
paths
:
-
$INTEGRATION_TEST_DIR
expire_in
:
14 days
devops/aws/requirements.txt
0 → 100644
View file @
fe80aecc
adal==1.2.2
boto3==1.14.40
botocore==1.17.54
certifi==2019.11.28
cffi==1.14.0
chardet==3.0.4
cryptography==2.8
docutils==0.15.2
idna==2.9
jmespath==0.10.0
pycparser==2.20
PyJWT==1.7.1
python-dateutil==2.8.1
requests==2.23.0
s3transfer==0.3.3
six==1.14.0
urllib3==1.25.8
xmlrunner==1.7.7
\ No newline at end of file
devops/scripts/aws_jwt_client.py
0 → 100644
View file @
fe80aecc
import
os
;
import
boto3
;
import
jwt
;
def
get_id_token
():
client
=
boto3
.
client
(
'cognito-idp'
,
region_name
=
os
.
environ
[
"AWS_REGION"
])
userAuth
=
client
.
initiate_auth
(
ClientId
=
os
.
environ
[
'AWS_COGNITO_CLIENT_ID'
],
AuthFlow
=
os
.
environ
[
'AWS_COGNITO_AUTH_FLOW'
],
AuthParameters
=
{
"USERNAME"
:
os
.
environ
[
'AWS_COGNITO_AUTH_PARAMS_USER'
],
"PASSWORD"
:
os
.
environ
[
'AWS_COGNITO_AUTH_PARAMS_PASSWORD'
]
})
print
(
userAuth
[
'AuthenticationResult'
][
'AccessToken'
])
def
get_invalid_token
():
#generate a dummy jwt
return
jwt
.
encode
({
'some'
:
'payload'
},
'secret'
,
algorithm
=
'HS256'
).
decode
(
"utf-8"
)
if
__name__
==
'__main__'
:
get_id_token
()
devops/scripts/ibm_jwt_client.py
View file @
fe80aecc
...
...
@@ -5,8 +5,8 @@ import json
url
=
os
.
getenv
(
'KEYCLOAK_URL'
)
client_id
=
os
.
getenv
(
'KEYCLOAK_CLIENT_ID'
)
client_secret
=
os
.
getenv
(
'KEYCLOAK_CLIENT_SECRET'
)
user
=
os
.
getenv
(
'AUTH_USER_ACCESS'
)
password
=
os
.
getenv
(
'AUTH_USER_ACCESS_PASSWORD'
)
user
=
os
.
getenv
(
'
IBM_SEISMIC_
AUTH_USER_ACCESS'
)
password
=
os
.
getenv
(
'
IBM_SEISMIC_
AUTH_USER_ACCESS_PASSWORD'
)
payload
=
"grant_type=password&client_id="
+
client_id
+
"&client_secret="
+
client_secret
+
"&username="
+
user
+
"&password="
+
password
+
"&scope=openid"
headers
=
{
...
...
devops/scripts/utest_build_run.sh
View file @
fe80aecc
...
...
@@ -18,6 +18,7 @@ npm install fs-jetpack
npm
install
inline-css
npm run test-automation
if
[
$?
-ne
0
]
;
then
exit
1
;
fi
node devops/scripts/cssfix.js
if
[
$?
-ne
0
]
;
then
exit
1
;
fi
...
...
docs/api/openapi.yaml
View file @
fe80aecc
...
...
@@ -1363,56 +1363,6 @@ paths:
404
:
description
:
"
Not
found"
# /api/v3/sre/maintenance:
# put:
# summary: "Service maintenance"
# description: "<ul><li>Service maintenance.</li><li>Required roles: seistore.system.admin/li></ul>"
# operationId: maintenance
# tags:
# - SRE
# parameters:
# - description: "operation id"
# in: query
# name: opid
# required: true
# type: string
# responses:
# 200:
# description: "Results of maintainence"
# 400:
# description: "Bad request"
# 401:
# description: "Unauthorized"
# 403:
# description: "Forbidden"
# 404:
# description: "Not found"
# /api/v3/sre/diagnostic:
# get:
# summary: "Perform diagnostics on the service"
# description: "<ul><li>Service diagnostic.</li><li>Required roles: seistore.system.admin/li></ul>"
# operationId: diagnostic
# tags:
# - SRE
# parameters:
# - description: "operation id"
# in: query
# name: opid
# required: true
# type: string
# responses:
# 200:
# description: "Results of the service diagnosis"
# 400:
# description: "Bad request"
# 401:
# description: "Unauthorized"
# 403:
# description: "Forbidden"
# 404:
# description: "Not found"
# ===========================================================================
# Endpoints Models Section
# ===========================================================================
...
...
@@ -1981,4 +1931,4 @@ x-google-management:
STANDARD
:
3000000
x-google-backend
:
deadline
:
180.0
\ No newline at end of file
deadline
:
180.0
docs/api/seismic_dms_seistore_openapi.yaml
View file @
fe80aecc
...
...
@@ -1418,56 +1418,6 @@ paths:
404
:
description
:
"
Not
found"
# /sre/maintenance:
# put:
# summary: "service maintenance"
# description: "<ul><li>Service maintenance.</li><li>Required roles: seistore.system.admin/li></ul>"
# operationId: maintenance
# tags:
# - SRE
# parameters:
# - description: "operation id"
# in: query
# name: opid
# required: true
# type: string
# responses:
# 200:
# description: "maintenance results"
# 400:
# description: "Bad request"
# 401:
# description: "Unauthorized"
# 403:
# description: "Forbidden"
# 404:
# description: "Not found"
# /sre/diagnostic:
# get:
# summary: "service diagnostic"
# description: "<ul><li>Service diagnostic.</li><li>Required roles: seistore.system.admin/li></ul>"
# operationId: diagnostic
# tags:
# - SRE
# parameters:
# - description: "operation id"
# in: query
# name: opid
# required: true
# type: string
# responses:
# 200:
# description: "diagnostic results"
# 400:
# description: "Bad request"
# 401:
# description: "Unauthorized"
# 403:
# description: "Forbidden"
# 404:
# description: "Not found"
# ===========================================================================
# Endpoints Models Section
# ===========================================================================
...
...
docs/templates/.env-sample-aws
0 → 100644
View file @
fe80aecc
#cloud provider is set to aws
CLOUDPROVIDER= "aws"
#specify service port, default is 5000
PORT= 5000
API_BASE_PATH=/api/seismic-store/v3
SERVICE_ENV=evd
ENVIRONMENT=
IMP_SERVICE_ACCOUNT_SIGNER=
AWS_REGION=
# redis instance url (defautl port 6379)
LOCKSMAP_REDIS_INSTANCE_ADDRESS=
LOCKSMAP_REDIS_INSTANCE_PORT= 6379
LOCKSMAP_REDIS_INSTANCE_KEY=
DES_REDIS_INSTANCE_ADDRESS=
DES_REDIS_INSTANCE_PORT=
DES_REDIS_INSTANCE_KEY=
DES_SERVICE_HOST=
DES_SERVICE_APPKEY=
JWKS_URL=
JWT_EXCLUDE_PATHS=
JWT_AUDIENCE=
# Features to disable ONLY the service run locally
JWT_ENABLE_FEATURE= "false"
FEATURE_FLAG_AUTHORIZATION= "false"
FEATURE_FLAG_LEGALTAG= "false"
FEATURE_FLAG_SEISMICMETA_STORAGE= "false"
FEATURE_FLAG_IMPTOKEN= "false"
FEATURE_FLAG_STORAGE_CREDENTIALS= "false"
FEATURE_FLAG_TRACE= "false"
FEATURE_FLAG_LOGGING= "false"
FEATURE_FLAG_STACKDRIVER_EXPORTER= "false"
npm-shrinkwrap.json
View file @
fe80aecc
...
...
@@ -865,6 +865,11 @@
"extend"
:
"^3.0.2"
}
},
"@google-cloud/precise-date"
:
{
"version"
:
"2.0.3"
,
"resolved"
:
"https://registry.npmjs.org/@google-cloud/precise-date/-/precise-date-2.0.3.tgz"
,
"integrity"
:
"sha512-+SDJ3ZvGkF7hzo6BGa8ZqeK3F6Z4+S+KviC9oOK+XCs3tfMyJCh/4j93XIWINgMMDIh9BgEvlw4306VxlXIlYA=="
},
"@google-cloud/projectify"
:
{
"version"
:
"2.0.1"
,
"resolved"
:
"https://registry.npmjs.org/@google-cloud/projectify/-/projectify-2.0.1.tgz"
,
...
...
@@ -875,6 +880,117 @@
"resolved"
:
"https://registry.npmjs.org/@google-cloud/promisify/-/promisify-2.0.3.tgz"
,
"integrity"
:
"sha512-d4VSA86eL/AFTe5xtyZX+ePUjE8dIFu2T8zmdeNBSa5/kNgXPCx/o/wbFNHAGLJdGnk1vddRuMESD9HbOC8irw=="
},
"@google-cloud/pubsub"
:
{
"version"
:
"2.10.0"
,
"resolved"
:
"https://registry.npmjs.org/@google-cloud/pubsub/-/pubsub-2.10.0.tgz"
,
"integrity"
:
"sha512-XM/Fc6/W/LYzGH2pnhGLDR5E6JNZFMfzyUFP5bWgC4FK1KqIZ4g6hrnCCO38G4JfH2i1IuSQuefPF7FrZZo9tw=="
,
"requires"
:
{
"@google-cloud/paginator"
:
"^3.0.0"
,
"@google-cloud/precise-date"
:
"^2.0.0"
,
"@google-cloud/projectify"
:
"^2.0.0"
,
"@google-cloud/promisify"
:
"^2.0.0"
,
"@opentelemetry/api"
:
"^0.12.0"
,
"@opentelemetry/tracing"
:
"^0.12.0"
,
"@types/duplexify"
:
"^3.6.0"
,
"@types/long"
:
"^4.0.0"
,
"arrify"
:
"^2.0.0"
,
"extend"
:
"^3.0.2"
,
"google-auth-library"
:
"^7.0.0"
,
"google-gax"
:
"^2.9.2"
,
"is-stream-ended"
:
"^0.1.4"
,
"lodash.snakecase"
:
"^4.1.1"
,
"p-defer"
:
"^3.0.0"
},
"dependencies"
:
{
"@opentelemetry/api"
:
{
"version"
:
"0.12.0"
,
"resolved"
:
"https://registry.npmjs.org/@opentelemetry/api/-/api-0.12.0.tgz"
,
"integrity"
:
"sha512-Dn4vU5GlaBrIWzLpsM6xbJwKHdlpwBQ4Bd+cL9ofJP3hKT8jBXpBpribmyaqAzrajzzl2Yt8uTa9rFVLfjDAvw=="
,
"requires"
:
{
"@opentelemetry/context-base"
:
"^0.12.0"
}
},
"@opentelemetry/context-base"
:
{
"version"
:
"0.12.0"
,
"resolved"
:
"https://registry.npmjs.org/@opentelemetry/context-base/-/context-base-0.12.0.tgz"
,
"integrity"
:
"sha512-UXwSsXo3F3yZ1dIBOG9ID8v2r9e+bqLWoizCtTb8rXtwF+N5TM7hzzvQz72o3nBU+zrI/D5e+OqAYK8ZgDd3DA=="
},
"gaxios"
:
{
"version"
:
"4.2.0"
,
"resolved"
:
"https://registry.npmjs.org/gaxios/-/gaxios-4.2.0.tgz"
,
"integrity"
:
"sha512-Ms7fNifGv0XVU+6eIyL9LB7RVESeML9+cMvkwGS70xyD6w2Z80wl6RiqiJ9k1KFlJCUTQqFFc8tXmPQfSKUe8g=="
,
"requires"
:
{
"abort-controller"
:
"^3.0.0"
,
"extend"
:
"^3.0.2"
,
"https-proxy-agent"
:
"^5.0.0"
,
"is-stream"
:
"^2.0.0"
,
"node-fetch"
:
"^2.3.0"
}
},
"gcp-metadata"
:
{
"version"
:
"4.2.1"
,
"resolved"
:
"https://registry.npmjs.org/gcp-metadata/-/gcp-metadata-4.2.1.tgz"
,
"integrity"
:
"sha512-tSk+REe5iq/N+K+SK1XjZJUrFPuDqGZVzCy2vocIHIGmPlTGsa8owXMJwGkrXr73NO0AzhPW4MF2DEHz7P2AVw=="
,
"requires"
:
{
"gaxios"
:
"^4.0.0"
,
"json-bigint"
:
"^1.0.0"
}
},
"google-auth-library"
:
{
"version"
:
"7.0.3"
,
"resolved"
:
"https://registry.npmjs.org/google-auth-library/-/google-auth-library-7.0.3.tgz"
,
"integrity"
:
"sha512-6wJNYqY1QUr5I2lWaUkkzOT2b9OCNhNQrdFOt/bsBbGb7T7NCdEvrBsXraUm+KTUGk2xGlQ7m9RgUd4Llcw8NQ=="
,
"requires"
:
{
"arrify"
:
"^2.0.0"
,
"base64-js"
:
"^1.3.0"
,
"ecdsa-sig-formatter"
:
"^1.0.11"
,
"fast-text-encoding"
:
"^1.0.0"
,
"gaxios"
:
"^4.0.0"
,
"gcp-metadata"
:
"^4.2.0"
,
"gtoken"
:
"^5.0.4"
,
"jws"
:
"^4.0.0"
,
"lru-cache"
:
"^6.0.0"
}
},
"is-stream"
:
{
"version"
:
"2.0.0"
,
"resolved"
:
"https://registry.npmjs.org/is-stream/-/is-stream-2.0.0.tgz"
,
"integrity"
:
"sha512-XCoy+WlUr7d1+Z8GgSuXmpuUFC9fOhRXglJMx+dwLKTkL44Cjd4W1Z5P+BQZpr+cR93aGP4S/s7Ftw6Nd/kiEw=="
},
"jwa"
:
{
"version"
:
"2.0.0"
,
"resolved"
:
"https://registry.npmjs.org/jwa/-/jwa-2.0.0.tgz"
,
"integrity"
:
"sha512-jrZ2Qx916EA+fq9cEAeCROWPTfCwi1IVHqT2tapuqLEVVDKFDENFw1oL+MwrTvH6msKxsd1YTDVw6uKEcsrLEA=="
,
"requires"
:
{
"buffer-equal-constant-time"
:
"1.0.1"
,
"ecdsa-sig-formatter"
:
"1.0.11"
,
"safe-buffer"
:
"^5.0.1"
}
},
"jws"
:
{
"version"
:
"4.0.0"
,
"resolved"
:
"https://registry.npmjs.org/jws/-/jws-4.0.0.tgz"
,
"integrity"
:
"sha512-KDncfTmOZoOMTFG4mBlG0qUIOlc03fmzH+ru6RgYVZhPkyiy/92Owlt/8UEN+a4TXR1FQetfIpJE8ApdvdVxTg=="
,
"requires"
:
{
"jwa"
:
"^2.0.0"
,
"safe-buffer"
:
"^5.0.1"
}
},
"lru-cache"
:
{
"version"
:
"6.0.0"
,
"resolved"
:
"https://registry.npmjs.org/lru-cache/-/lru-cache-6.0.0.tgz"
,
"integrity"
:
"sha512-Jo6dJ04CmSjuznwJSS3pUeWmd/H0ffTlkXXgwZi+eq1UCmqQwCh+eLsYOYCwY991i2Fah4h1BEMCx4qThGbsiA=="
,
"requires"
:
{
"yallist"
:
"^4.0.0"
}
},
"yallist"
:
{
"version"
:
"4.0.0"
,
"resolved"
:
"https://registry.npmjs.org/yallist/-/yallist-4.0.0.tgz"
,
"integrity"
:
"sha512-3wdGidZyq5PB084XLES5TpOSRA3wjXAlIWMhum2kRcv/41Sn2emQ0dycQW4uZXLejwKvg6EsvbdlVL+FYEct7A=="
}
}
},
"@google-cloud/storage"
:
{
"version"
:
"5.7.0"
,
"resolved"
:
"https://registry.npmjs.org/@google-cloud/storage/-/storage-5.7.0.tgz"
,
...
...
@@ -1509,6 +1625,108 @@
"resolved"
:
"https://registry.npmjs.org/@opentelemetry/context-base/-/context-base-0.6.1.tgz"
,
"integrity"
:
"sha512-5bHhlTBBq82ti3qPT15TRxkYTFPPQWbnkkQkmHPtqiS1XcTB69cEKd3Jm7Cfi/vkPoyxapmePE9tyA7EzLt8SQ=="
},
"@opentelemetry/core"
:
{
"version"
:
"0.12.0"
,
"resolved"
:
"https://registry.npmjs.org/@opentelemetry/core/-/core-0.12.0.tgz"
,
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